Details for model: "ADAM9 -> high & RC3H2 -> high" vs. Other

  • GEO dataset ID: METABRIC
  • Cancer Type: Breast cancer
  • Clinical Variable: triple = "negative"
  • Number of samples:
  • Gene 1: ADAM9 (probe = "ILMN_1727524")
  • Gene 2: RC3H2 (probe = "ILMN_1710738")

Statistical details:

  • Model: "ADAM9-> high & RC3H2 -> high" vs. Other (p-value: 6.47e-06, positive effect: Other; )
  • Gene 1: ADAM9 (p-value:0.029, positive effect: ADAM9__low;)
  • Gene 2: RC3H2 (p-value:0.0726, positive effect: RC3H2__low;)

Model: "ADAM9-> high & RC3H2 -> high" vs. Other

  • p-value: 6.47e-06
  • Positive effect: Other;
NObservedExpected(O-E)^2/E(O-E)^2/V
group=ADAM9__high|RC3H2__high;6633.517.813.7420.3
group=Other;25378.293.92.6120.3

Chisq= 20.3 on 1 degrees of freedom, p= 6.47e-06

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Gene 1: ADAM9 (probe="ILMN_1727524")

  • p-value: 0.029
  • positve effect: ADAM9__low;
NObservedExpected(O-E)^2/E(O-E)^2/V
group=ADAM9__high;14855.345.32.214.77
group=ADAM9__low;17156.466.41.514.77

Chisq= 4.8 on 1 degrees of freedom, p= 0.029

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Gene 2: RC3H2 (probe="ILMN_1710738")

  • p-value: 0.0726
  • positve effect: RC3H2__low;
NObservedExpected(O-E)^2/E(O-E)^2/V
group=RC3H2__high;16866.257.81.223.22
group=RC3H2__low;15145.553.91.313.22

Chisq= 3.2 on 1 degrees of freedom, p= 0.0726

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